Creates DH lines from each individual in a population.
Only works with diploid individuals. For polyploids, use
reduceGenome
and doubleGenome
.
Arguments
- pop
an object of 'Pop' superclass
- nDH
total number of DH lines per individual
- useFemale
should female recombination rates be used.
- keepParents
should previous parents be used for mother and father.
- simParam
an object of 'SimParam' class
Value
Returns an object of Pop-class
Examples
#Create founder haplotypes
founderPop = quickHaplo(nInd=2, nChr=1, segSites=10)
#Set simulation parameters
SP = SimParam$new(founderPop)
SP$nThreads = 1L
#Create population
pop = newPop(founderPop, simParam=SP)
#Create 1 DH for each individual
pop2 = makeDH(pop, simParam=SP)