The raw population class contains only genotype data.
Usage
# S4 method for RawPop
[(x, i)
# S4 method for RawPop
c(x, ...)
# S4 method for RawPop
show(object)
isRawPop(x)
Arguments
- x
a 'RawPop' object
- i
index of individuals
- ...
additional 'RawPop' objects
- object
a 'RawPop' object
Methods (by generic)
[
: Extract RawPop by index
c(RawPop)
: Combine multiple RawPops
show(RawPop)
: Show population summary
Slots
nInd
number of individuals
nChr
number of chromosomes
ploidy
level of ploidy
nLoci
number of loci per chromosome
geno
list of nChr length containing chromosome genotypes.
Each element is a three dimensional array of raw values.
The array dimensions are nLoci by ploidy by nInd.